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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4411750_4568675_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4411750 - 4568675

Intron Length:

156926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCAAG

5'SS Class:

major

3'SS Sequence:

AGGGAGGAGTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

TTAGTCTCAATA

Flanking Amino Acid:

AGSASTGEHSEKSEGC*

Intron Amino Acid Position:

1543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

43.5

Major BPS

0.45

1.2

71.6

36.4

Major PPT

45.1

-0.2

1.2

32.3

45.2

Minor 5ss

37.7

-1.4

3.1

47.9

47.8

Minor BPS

57.7

0.24

1.6

67.85

Associated Gene:

Gene:

ARHGEF12

Ensembl Gene ID:

ENSAPLG00000014925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015657

4343160 - 4568695

225536