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Intron Name: Anas_platyrhynchos_platyrhynchos_25_451123_451221_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
451123 - 451221

Intron Length:
99

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
ACG|GCCAGGTAG

5'SS Class:
major

3'SS Sequence:
TGCTCGCCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCGGAAT

U12 Branch Point Sequence:
GGGGCCGGAATC

Flanking Amino Acid:
SAREKAAFVHGGPSGLWGDT

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.7
0.42
1.3
50.9
46.1

Major BPS
43.9
-0.3
1.5
47
43.3

Major PPT
62.5
0.28
1
54.4
41.5

Minor 5ss
21.6
-3.3
3.8
30
43

Minor BPS
42.6
-0.5
2.1
48.45
41.6

Associated Gene:

Gene:
DCPS

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

450915 - 475352
24438