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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4548129_4550878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4548129 - 4550878

Intron Length:

2750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TCAGGTCTAATC

Flanking Amino Acid:

ASMSHTILQKAAELGMASAY

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

80.8

0.69

0.7

75.9

26.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.1

-0.5

50.87

40.8

Associated Gene:

Gene:

GRIK4

Ensembl Gene ID:

ENSAPLG00000014007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014638

4535796 - 4588397

52602

ENSAPLT00000038130

4429387 - 4588397

159011

ENSAPLT00000038046

4531488 - 4588397

56910