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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4564310_4569517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4564310 - 4569517

Intron Length:

5208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TGTCCTGTAAAT

Flanking Amino Acid:

LQHTRGGFRQIGHWHVSEGL

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

85.1

0.79

0.7

77.1

31.6

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

0.14

2.1

75.53

40.8

Associated Gene:

Gene:

GRIK4

Ensembl Gene ID:

ENSAPLG00000014007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038130

4429387 - 4588397

159011

ENSAPLT00000038046

4531488 - 4588397

56910

ENSAPLT00000014638

4535796 - 4588397

52602