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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4577479_4582044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4577479 - 4582044

Intron Length:

4566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

AAAGCTCAAACT

Flanking Amino Acid:

GISILYRVHMGRKPGYFSFL

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.5

36.9

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

79.3

0.66

0.8

69.6

36.7

Minor 5ss

36.8

-1.5

3.4

46.6

43.5

Minor BPS

44.9

-0.3

60.96

42.6

Associated Gene:

Gene:

GRIK4

Ensembl Gene ID:

ENSAPLG00000014007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038046

4531488 - 4588397

56910

ENSAPLT00000014638

4535796 - 4588397

52602

ENSAPLT00000038130

4429387 - 4588397

159011