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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4583981_4584724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4583981 - 4584724

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CGTCTCTCACCG

Flanking Amino Acid:

ALSTRCVSGVWWAFTLIIIS

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

71.1

35.1

Major BPS

72.7

0.56

30.1

Major PPT

72.7

0.51

0.7

65.3

30.5

Minor 5ss

37.2

-1.5

3.2

44.7

44.3

Minor BPS

45.3

-0.4

1.9

49.3

44.3

Associated Gene:

Gene:

GRIK4

Ensembl Gene ID:

ENSAPLG00000014007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014638

4535796 - 4588397

52602

ENSAPLT00000038130

4429387 - 4588397

159011

ENSAPLT00000038046

4531488 - 4588397

56910