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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4586907_4588206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4586907 - 4588206

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGCAGT

5'SS Class:

major

3'SS Sequence:

CTTGCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTTAG

U12 Branch Point Sequence:

GGTGCCTTAGCG

Flanking Amino Acid:

TKGYGIGMPVGSVFRDEFDL

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

47.6

Major BPS

44.9

-0.3

1.6

39.3

42.6

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

40.2

-1.1

3.3

57.5

46.9

Minor BPS

56.8

0.07

1.8

61.14

46.1

Associated Gene:

Gene:

GRIK4

Ensembl Gene ID:

ENSAPLG00000014007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038130

4429387 - 4588397

159011

ENSAPLT00000038046

4531488 - 4588397

56910

ENSAPLT00000014638

4535796 - 4588397

52602