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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4654330_4659041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4654330 - 4659041

Intron Length:

4712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TGTTCTGTAATT

Flanking Amino Acid:

MEFPEEEVPFRYHELVTKYG

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

84.8

32.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

38.3

-1.3

3.3

57.7

46.5

Minor BPS

64.9

0.55

84.22

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037180

4653011 - 4672466

19456

ENSAPLT00000030542

4653011 - 4674546

21536

ENSAPLT00000014527

4654011 - 4669072

15062