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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4659741_4661844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659741 - 4661844

Intron Length:

2104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTACCTCTGAGT

Flanking Amino Acid:

NLRSINLHKSGLHCWEDIDK

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

70.5

0.46

0.9

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

-0

1.9

70.14

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037180

4653011 - 4672466

19456

ENSAPLT00000030542

4653011 - 4674546

21536

ENSAPLT00000014527

4654011 - 4669072

15062