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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4666711_4668017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4666711 - 4668017

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCTA

5'SS Class:

major

3'SS Sequence:

TACCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCTACC

Flanking Amino Acid:

MLSYRLNLPSVLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

71.3

40.3

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.8

76.9

31.3

Minor 5ss

40.7

-1

3.1

60.2

44.1

Minor BPS

55.1

0.14

2.1

76.81

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014527

4654011 - 4669072

15062