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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4666711_4668922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4666711 - 4668922

Intron Length:

2212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TACCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCTACC

Flanking Amino Acid:

PATPQGSPMKDRLNLPSVLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.8

76.9

31.3

Minor 5ss

30.3

-2.3

3.5

Minor BPS

55.1

0.14

2.1

76.81

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037180

4653011 - 4672466

19456

ENSAPLT00000030542

4653011 - 4674546

21536