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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4744026_4744269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4744026 - 4744269

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGCCAT

U12 Branch Point Sequence:

CCTGCCGAGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

53.4

0.08

1.4

64.2

Major PPT

0.83

0.7

80.6

31.4

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

38.9

-1

2.3

40.9

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019102

4743765 - 4755344

11580

ENSAPLT00000013915

4743765 - 4755774

12010