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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4744402_4744611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4744402 - 4744611

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCGTG

5'SS Class:

major

3'SS Sequence:

TCCCTCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCGTCCTCCATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

60.4

44.5

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.54

0.9

68.6

31.7

Minor 5ss

42.9

-0.8

3.5

65.4

45.7

Minor BPS

48.1

-0.2

2.1

54.94

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019102

4743765 - 4755344

11580

ENSAPLT00000013915

4743765 - 4755774

12010