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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4746372_4746849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4746372 - 4746849

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

TTCTGCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CGGCGCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.4

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

83.1

0.75

0.8

31.7

Minor 5ss

34.9

-1.7

3.2

46.3

42.1

Minor BPS

40.9

-0.7

45.46

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019102

4743765 - 4755344

11580

ENSAPLT00000013915

4743765 - 4755774

12010