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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4750228_4751033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4750228 - 4751033

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

GTTGCAGTAACA

Flanking Amino Acid:

SKSITTIKGKVIPPPVIRVE

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

30.6

Major BPS

54.4

0.11

1.2

36.4

Major PPT

78.2

0.63

0.8

69.1

Minor 5ss

34.7

-1.7

3.3

50.4

Minor BPS

49.1

-0

2.3

69.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019102

4743765 - 4755344

11580

ENSAPLT00000013915

4743765 - 4755774

12010