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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4752679_4752778_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4752679 - 4752778

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

CCGTCCCTTCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ACCCTATTAACT

Flanking Amino Acid:

VQRDEQYLFLVRVMSPYQGP

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

56.8

43.5

Major BPS

81.9

0.79

0.8

81.9

Major PPT

52.9

0.07

1.7

57.6

38.6

Minor 5ss

42.9

-0.8

3.2

55.5

44.3

Minor BPS

55.8

0.26

1.6

68.48

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019102

4743765 - 4755344

11580

ENSAPLT00000013915

4743765 - 4755774

12010