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Intron Name: Anas_platyrhynchos_platyrhynchos_25_4755286_4755706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4755286 - 4755706

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAACCAA

U12 Branch Point Sequence:

GGCAGCGTAACA

Flanking Amino Acid:

SAIFSSGDDLGDEDDEAPMI

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.6

39.1

Major BPS

45.9

-0.2

1.1

50.8

33.6

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

-2.2

3.3

40.9

45.3

Minor BPS

43.5

-0.4

2.3

53.4

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013915

4743765 - 4755774

12010