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Intron Name: Anas_platyrhynchos_platyrhynchos_25_488564_492154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

488564 - 492154

Intron Length:

3591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGAAAA

5'SS Class:

major

3'SS Sequence:

TTTCCTTTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TTGTGCTGAGCC

Flanking Amino Acid:

NKGKCNHQLDGGREDGPVDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

67.8

39.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

81.6

0.71

0.9

76.7

37.4

Minor 5ss

-2.2

3.1

31.2

42.7

Minor BPS

49.3

-0

2.1

67.23

44.2

Associated Gene:

Gene:

ST3GAL4

Ensembl Gene ID:

ENSAPLG00000002517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021971

488423 - 504314

15892

ENSAPLT00000002553

488423 - 504314

15892