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Intron Name: Anas_platyrhynchos_platyrhynchos_25_501807_501888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

501807 - 501888

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCGGTCTCACTG

Flanking Amino Acid:

VERKAAQLIGNYTRDHPLFL

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

72.6

0.51

68.9

37.1

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

42.3

-0.7

1.8

41.93

Associated Gene:

Gene:

ST3GAL4

Ensembl Gene ID:

ENSAPLG00000002517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021971

488423 - 504314

15892

ENSAPLT00000002553

488423 - 504314

15892