Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_502865_502984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

502865 - 502984

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCC

5'SS Class:

major

3'SS Sequence:

CCCCGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

ATGTCCCCATGT

Flanking Amino Acid:

ETINTYDVVIRLNNAPVHGY

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

55.4

40.1

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

62.4

0.28

0.9

52.4

36.8

Minor 5ss

30.3

-2.3

3.5

42.7

44.4

Minor BPS

42.5

-0.4

2.2

63.38

46.4

Associated Gene:

Gene:

ST3GAL4

Ensembl Gene ID:

ENSAPLG00000002517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021971

488423 - 504314

15892

ENSAPLT00000002553

488423 - 504314

15892