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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5054266_5055373_R

Intron Information:

Intron Rank:

149736

Intron Class:

major

Intron Phase:

Intron Coordinates:

5054266 - 5055373

Intron Length:

1108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATTATT

5'SS Class:

major

3'SS Sequence:

GTCTCTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

CTTGGGTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.2

84.9

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

81.5

0.71

0.8

73.1

37.3

Minor 5ss

38.1

-1.3

2.8

52.4

Minor BPS

47.8

-0.1

2.5

66.36

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035137

5044185 - 5058521

14337