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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5124185_5126453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5124185 - 5126453

Intron Length:

2269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTGTTGATAACC

Flanking Amino Acid:

DFAAEAASKADVHVEPHKKQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.9

0.78

0.8

79.9

32.1

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

50.3

-0

2.3

70.57

Associated Gene:

Gene:

UBASH3B

Ensembl Gene ID:

ENSAPLG00000011138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011612

5082766 - 5143660

60895