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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5149918_5152891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5149918 - 5152891

Intron Length:

2974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTAATAGTT

Flanking Amino Acid:

LHIAALLLMQGDFAEAGGET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.8

0.51

68.8

37.1

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

43.7

-0.4

1.9

64.4

39.7

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942