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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5153039_5155651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5153039 - 5155651

Intron Length:

2613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGCAT

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

GFTIFLDTKWGLRDQRYKLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

54.5

0.11

1.4

65.8

Major PPT

89.6

0.89

0.7

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942