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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5156164_5158715_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5156164 - 5158715

Intron Length:

2552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

AACGGGCGTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

AAGCACTTAAAT

Flanking Amino Acid:

WLLDNGIQLPGDTTHKLEAN

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

0.5

1.1

76.9

32.8

Major PPT

49.3

-0

38.8

39.3

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

54.8

0.23

1.6

68.14

41.6

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942