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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5160101_5160865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5160101 - 5160865

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TCTGCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGAAA

U12 Branch Point Sequence:

GTGTAAGAAACT

Flanking Amino Acid:

ENLQPAATSTWPEATSAAAG

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

48.4

-0.1

1.4

56.3

37.2

Major PPT

82.4

0.73

0.8

76.8

31.8

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

40.5

-0.6

2.5

62.77

46.7

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942