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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5160938_5161409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5160938 - 5161409

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGTTAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAG

U12 Branch Point Sequence:

TTGCCCTTCAGA

Flanking Amino Acid:

SGTPSHHVPNGTDTASNGTV

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

69.9

37.5

Major BPS

50.2

0.01

1.5

54.7

43.1

Major PPT

91.6

0.94

0.6

84.9

29.9

Minor 5ss

39.9

-1.1

52.6

44.7

Minor BPS

53.2

0.09

2.1

68.47

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942