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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5162062_5162324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5162062 - 5162324

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CAGTGTTTAATT

Flanking Amino Acid:

LKKAHGVWKRENDNSEQTLE

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.61

0.9

72.3

37.9

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

0.27

1.8

68.12

43.7

Associated Gene:

Gene:

CRTAM

Ensembl Gene ID:

ENSAPLG00000010895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011360

5149869 - 5163810

13942