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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5173616_5175371_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5173616 - 5175371

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TAACTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTTTTGATAACT

Flanking Amino Acid:

KWYLKSQQLKDHQNKWSQRK

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

71.1

41.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

72.2

0.5

0.9

69.9

40.9

Minor 5ss

-0.3

2.8

68.2

42.5

Minor BPS

53.3

0.18

2.3

80.09

42.1

Associated Gene:

Gene:

JHY

Ensembl Gene ID:

ENSAPLG00000010814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011257

5165526 - 5182048

16523