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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5176016_5176950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5176016 - 5176950

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

AAATATATATCT

Flanking Amino Acid:

SYHNHAVSSLRPSQSPAACC

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

71.4

0.53

67.3

39.3

Major PPT

74.2

0.55

1.7

88.2

29.1

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

45.1

-0.2

1.9

62.8

40.6

Associated Gene:

Gene:

JHY

Ensembl Gene ID:

ENSAPLG00000010814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011257

5165526 - 5182048

16523