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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5177225_5178941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5177225 - 5178941

Intron Length:

1717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAG

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AAATCTGTCACT

Flanking Amino Acid:

KQKQPKVYKKPYSSKTYMNL

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.7

41.1

Major BPS

69.8

0.49

70.3

31.8

Major PPT

82.9

0.74

0.9

80.3

37.3

Minor 5ss

38.8

-1.3

2.8

48.4

47.4

Minor BPS

46.9

-0.1

2.3

68.11

42.8

Associated Gene:

Gene:

JHY

Ensembl Gene ID:

ENSAPLG00000010814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011257

5165526 - 5182048

16523