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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5190715_5191626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5190715 - 5191626

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCGCAG

U12 Branch Point Sequence:

CCGGCCGCAGCC

Flanking Amino Acid:

HHHPYFLTASGVPVPALFQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

41.3

Major BPS

36.5

-0.8

1.6

42.9

Major PPT

68.4

0.42

0.9

58.4

38.4

Minor 5ss

32.6

-2

3.1

33.4

41.6

Minor BPS

37.2

-0.9

2.2

41.56

45.3

Associated Gene:

Gene:

BSX

Ensembl Gene ID:

ENSAPLG00000018698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018230

5190115 - 5191894

1780