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Intron Name: Anas_platyrhynchos_platyrhynchos_25_519866_520726_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
519866 - 520726

Intron Length:
861

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGCATC

5'SS Class:
major

3'SS Sequence:
TATTTTCAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTATTTTCAAAC

Flanking Amino Acid:
DTEIIRLKEQGTEMKSGAGI

Intron Amino Acid Position:
479

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
72.2
39.5

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
74.5
0.55
1
71
38.6

Minor 5ss
37.1
-1.5
3.3
50.7
46.2

Minor BPS
57.1
0.2
1.6
68.4
36.8

Associated Gene:

Gene:
KIRREL3

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

506331 - 755834
249504

506331 - 590542
84212

506331 - 613669
107339