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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5204675_5205912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5204675 - 5205912

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTTTGCTCAAGT

Flanking Amino Acid:

FPHPLAFWEQEQALWL*

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

71.3

34.3

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

85.1

0.79

0.8

79.3

32.7

Minor 5ss

26.5

-2.7

3.1

32.6

42.2

Minor BPS

57.4

0.31

2.3

84.08

42.8

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194