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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5211036_5211444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5211036 - 5211444

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTGT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

AGGTGCTGAGTT

Flanking Amino Acid:

EIINWLDKNQTAEKEEFEHQ

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

72.3

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

40.2

-1.1

3.2

58.8

45.7

Minor BPS

44.7

-0.3

60.02

43.6

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194

ENSAPLT00000011131

5210691 - 5214788

4098