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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5212673_5212999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5212673 - 5212999

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AGGCTCCTAATG

Flanking Amino Acid:

NPDEAVAYGAAVQAAILSGD

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

47.1

-0.3

1.7

48.44

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194

ENSAPLT00000011131

5210691 - 5214788

4098