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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5213556_5213649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5213556 - 5213649

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTGT

5'SS Class:

strong_major

3'SS Sequence:

AATTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

AAATTGTGAAAA

Flanking Amino Acid:

AAIAYGLDKKVGAERNVLIF

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.4

41.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.7

0.71

0.8

78.2

35.3

Minor 5ss

55.9

0.2

2.5

73.6

Minor BPS

44.1

-0.4

2.1

54.04

37.5

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194

ENSAPLT00000011131

5210691 - 5214788

4098