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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5213803_5213902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5213803 - 5213902

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ACATTTTTGATT

Flanking Amino Acid:

KEIAEAYLGKTVTNAVVTVP

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

-2.2

3.3

45.6

Minor BPS

60.3

0.41

1.1

68.48

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194

ENSAPLT00000011131

5210691 - 5214788

4098