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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5214109_5214578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5214109 - 5214578

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAATAAGG

5'SS Class:

major

3'SS Sequence:

CTGACTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AATTCTTCAATG

Flanking Amino Acid:

VAMNPTNTVFDAKRLIGRRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

59.6

Major BPS

78.2

0.7

79.9

32.6

Major PPT

77.8

0.63

0.9

68.9

41.8

Minor 5ss

33.4

-1.9

2.9

41.6

44.6

Minor BPS

60.7

0.2

1.6

63.26

38.9

Associated Gene:

Gene:

HSPA8

Ensembl Gene ID:

ENSAPLG00000010667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048256

5204595 - 5214788

10194

ENSAPLT00000011131

5210691 - 5214788

4098