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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5226265_5226605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5226265 - 5226605

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTTCCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

TTTTGGTTAATC

Flanking Amino Acid:

AEHLPPTSRVNISNPGQVLL

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

62.9

43.3

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

86.4

0.82

0.8

84.4

30.5

Minor 5ss

35.8

-1.6

2.9

46.9

42.4

Minor BPS

57.8

0.22

2.4

77.77

38.8

Associated Gene:

Gene:

CLMP

Ensembl Gene ID:

ENSAPLG00000010660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011095

5222613 - 5265402

42790