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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5227535_5228288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5227535 - 5228288

Intron Length:

754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAAAAT

U12 Branch Point Sequence:

TGATCAGTGACT

Flanking Amino Acid:

LHISETVQKAVITYSGGRVY

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

66.3

39.6

Major BPS

52.8

0.07

1.3

61.7

41.5

Major PPT

71.8

0.49

0.8

64.6

Minor 5ss

32.1

-2

3.4

41.3

45.2

Minor BPS

49.2

0.02

2.3

74.19

42.3

Associated Gene:

Gene:

CLMP

Ensembl Gene ID:

ENSAPLG00000010660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011095

5222613 - 5265402

42790