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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5228447_5264438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5228447 - 5264438

Intron Length:

35992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

TGGCCTCTGACC

Flanking Amino Acid:

GMSALSILFLASCSVWLAEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

0.76

0.8

81.2

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

49.6

-0

1.7

60.78

38.5

Associated Gene:

Gene:

CLMP

Ensembl Gene ID:

ENSAPLG00000010660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011095

5222613 - 5265402

42790