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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5329677_5331850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5329677 - 5331850

Intron Length:

2174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTATTCATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTTAAG

Flanking Amino Acid:

VREKKEYSESRETDLYDSCA

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

69.4

0.44

1.1

72.8

36.3

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

49.7

-0.1

2.1

63.42

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019800

5328845 - 5333705

4861