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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5329677_5341456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5329677 - 5341456

Intron Length:

11780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCTGTCTTAATT

Flanking Amino Acid:

VREKKEYSESSSQQSSQQSS

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

90.1

0.9

0.7

85.6

27.2

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

73.3

0.81

1.3

82.74

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032849

5295550 - 5359100

63551

ENSAPLT00000022429

5269921 - 5341604

71684

ENSAPLT00000020617

5281825 - 5341604

59780