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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5341535_5356461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5341535 - 5356461

Intron Length:

14927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTGTCTTGATT

Flanking Amino Acid:

RFLSPHMRDDRSVLPPCWLA

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

83.8

0.84

73.6

41.8

Major PPT

71.6

0.49

70.2

40.4

Minor 5ss

36.8

-1.5

3.2

49.6

46.6

Minor BPS

72.3

0.78

1.3

86.06

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032849

5295550 - 5359100

63551