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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5386689_5388217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5386689 - 5388217

Intron Length:

1529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCGATTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTCTTTTCATT

Flanking Amino Acid:

SGRSGAKNSKSHKRLSKKSQ

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

100

1.24

0.5

100

Major PPT

60.6

0.24

1.1

36.1

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

53.6

0.19

1.7

71.97

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020109

5360421 - 5423954

63534