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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5393993_5403024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5393993 - 5403024

Intron Length:

9032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

CTCTCTTTAACA

Flanking Amino Acid:

NSKKSQSWYNVLSPTYKQRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

74.7

0.61

65.9

40.9

Major PPT

82.7

0.74

0.9

77.1

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

78.2

0.88

1.2

78.6

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026453

5360421 - 5418917

58497

ENSAPLT00000040004

5360421 - 5418917

58497

ENSAPLT00000025086

5360421 - 5418956

58536

ENSAPLT00000039125

5360421 - 5422752

62332

ENSAPLT00000020109

5360421 - 5423954

63534

ENSAPLT00000034729

5352688 - 5419757

67070

ENSAPLT00000010791

5378962 - 5417398

38437

ENSAPLT00000026528

5371313 - 5419757

48445