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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5404775_5407037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5404775 - 5407037

Intron Length:

2263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAGA

5'SS Class:

major

3'SS Sequence:

CTCCCTCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

GAAAATGTACCC

Flanking Amino Acid:

RLWQNALLDKPLCPKELWHF

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

0.52

1.5

79.6

35.6

Major PPT

78.6

0.64

0.7

76.7

25.4

Minor 5ss

29.9

-2.3

3.3

40.1

45.6

Minor BPS

37.4

-0.9

2.1

42.86

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025086

5360421 - 5418956

58536

ENSAPLT00000039125

5360421 - 5422752

62332

ENSAPLT00000045884

5360421 - 5418917

58497

ENSAPLT00000020109

5360421 - 5423954

63534

ENSAPLT00000034729

5352688 - 5419757

67070

ENSAPLT00000040004

5360421 - 5418917

58497

ENSAPLT00000010791

5378962 - 5417398

38437

ENSAPLT00000026528

5371313 - 5419757

48445

ENSAPLT00000026453

5360421 - 5418917

58497

ENSAPLT00000039254

5401222 - 5419757

18536