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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5407799_5408588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5407799 - 5408588

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TTGCCCTCATTA

Flanking Amino Acid:

STGSSEAPASFDGVLPEEEE

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

33.6

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

75.1

0.56

0.9

68.8

37.1

Minor 5ss

37.7

-1.4

3.3

53.4

43.8

Minor BPS

51.1

0.03

1.8

65.13

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026453

5360421 - 5418917

58497

ENSAPLT00000039254

5401222 - 5419757

18536

ENSAPLT00000025086

5360421 - 5418956

58536

ENSAPLT00000039125

5360421 - 5422752

62332

ENSAPLT00000020109

5360421 - 5423954

63534

ENSAPLT00000034729

5352688 - 5419757

67070

ENSAPLT00000045884

5360421 - 5418917

58497

ENSAPLT00000010791

5378962 - 5417398

38437

ENSAPLT00000026528

5371313 - 5419757

48445

ENSAPLT00000040004

5360421 - 5418917

58497