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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5410246_5410743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5410246 - 5410743

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGCTTTTTGATA

Flanking Amino Acid:

PKTATVTETQTMYKASQESE

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.1

0.7

0.9

76.3

36.9

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

61.7

0.36

1.2

65.55

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025086

5360421 - 5418956

58536

ENSAPLT00000039125

5360421 - 5422752

62332

ENSAPLT00000045884

5360421 - 5418917

58497

ENSAPLT00000020109

5360421 - 5423954

63534

ENSAPLT00000034729

5352688 - 5419757

67070

ENSAPLT00000040004

5360421 - 5418917

58497

ENSAPLT00000010791

5378962 - 5417398

38437

ENSAPLT00000026528

5371313 - 5419757

48445

ENSAPLT00000026453

5360421 - 5418917

58497

ENSAPLT00000039254

5401222 - 5419757

18536